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Home » All Recipes » Quick Breads

Updated: Jun 10, 2026 · Published: Mar 20, 2023 . by Kelly Bloom · This website uses affiliate links. · Leave a Comment

Gluten Free Chocolate Chip Muffins

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Gluten free chocolate chip muffins bake up tall, fluffy, and moist with 1:1 gluten free flour and lots of chocolate chips in every bite. Make them jumbo, regular, or mini size with the same easy batter.

Tall gluten free chocolate chip muffins with golden domes and chocolate chips on a white background.

Why You'll Love This Gluten Free Chocolate Chip Muffins Recipe

These muffins give you the bakery-style height and soft crumb people want from chocolate chip muffins without building a custom gluten free flour blend.

A good 1:1 gluten free all purpose flour keeps the recipe practical without a special ingredient scavenger hunt, and the same batter works for jumbo, regular, or mini muffins.

  • Uses 1:1 gluten free flour: No custom flour blend, extra starches, or hard-to-find gluten free baking supplies needed.
  • Tall bakery-style tops: The muffins rise into golden domes with the right oven temperature and a gently mixed batter.
  • Flexible muffin sizes: Use the same batter for 6 jumbo muffins, 12 regular muffins, or 24 mini muffins.
Gluten free chocolate chip muffins with golden tops and chocolate chips grouped on a white surface.

Ingredients Overview

A 1:1 gluten free all purpose flour blend is the key ingredient for muffins that bake up soft instead of crumbly. Choose a blend made to replace regular all-purpose flour in baking recipes like this.

About The Flour for Gluten Free Muffins

Gluten free flour blends can behave differently from brand to brand, so I stick with blends that work reliably in muffins, quick breads, and simple gluten free baking:

  • King Arthur Measure for Measure Gluten-Free Flour
  • Better Batter Gluten Free All Purpose Flour
  • Cup4Cup All Purpose Gluten Free Flour

Full ingredient amounts and preparation instructions are in the printable recipe card at the bottom of this post.

Ingredients for gluten free chocolate chip muffins with 1:1 gluten free flour, chocolate chips, sugar, milk, oil, egg, vanilla, baking powder, and salt.

How To Make Gluten Free Chocolate Chip Muffins

This recipe uses the classic muffin method: mix the wet ingredients, whisk the dry ingredients separately, then combine them gently before folding in the chocolate chips. Refer to the step-by-step visual guide below.

⚠️ Pro Tip

The 375°F oven temperature helps the muffins rise into domes without over-browning the tops before the centers bake through. Use the bake time chart below for jumbo, regular, or mini muffins, and start checking at the low end of the range.

Milk, egg, vegetable oil, and vanilla in a glass bowl with a whisk for gluten free chocolate chip muffins.

Step 1: Preheat the oven to 375°F. Line a jumbo muffin pan, regular muffin pan, or mini muffin pan as needed. Whisk the oil, egg, milk, and vanilla in a large mixing bowl.

Step 2: In a separate medium bowl, whisk the 1:1 gluten free flour blend, cornstarch, sugar, baking powder, and salt until the dry ingredients are evenly mixed.

1:1 gluten free flour blend, sugar, cornstarch, baking powder, and salt in a glass bowl with a whisk.
Gluten free chocolate chip muffin batter mixed in a glass bowl on a white marble surface.

Step 3: Add the dry ingredients to the wet ingredients and mix lightly, just until a few small streaks of flour remain.

Step 4: Gently fold the chocolate chips into the batter. Stop mixing as soon as they are distributed. The batter should look a little lumpy.

Chocolate chips folded into gluten free muffin batter in a glass bowl with a black spatula.
Gluten free chocolate chip muffin batter portioned into paper liners in a muffin pan.

Step 5: Fill each muffin cup ¾ full, regardless of the muffin pan size. Bake according to the muffin size chart below.

Muffin sizeYieldBake time
Jumbo muffins622 to 25 minutes
Regular muffins1217 to 20 minutes
Mini muffins2410 to 14 minutes

Step 6: Check the muffins with a toothpick inserted into the center muffin. Let the muffins cool in the pan for 10 to 15 minutes, then transfer them to a cooling rack.

Baked gluten free chocolate chip muffins in a muffin pan cooling on a wire rack.

Serving Suggestions

Gluten free chocolate chip muffins work well for breakfast, brunch, snack plates, or packed lunches. Serve them slightly warm with a strawberry smoothie or peach smoothie for a quick breakfast.

For a larger breakfast spread, pair them with French toast breakfast casserole, a savory green chile and egg breakfast casserole, fresh fruit salad, yogurt, and coffee or tea.

Baked gluten free chocolate chip muffins cooling on a black wire rack over white marble.

Substitutions and Variations

Use this batter as a starting point for simple swaps that do not change the structure of the muffin.

  • Dairy free muffins: Replace the milk with almond milk, oat milk, hemp milk, coconut milk, or another plant based milk you like.
  • Different chocolate chips: Use semi-sweet, dark chocolate, milk chocolate, mini chocolate chips, white chocolate chips, or dairy free chocolate chips.
  • Blueberry muffins: Use blueberries instead of chocolate chips, keeping the same total amount of mix-ins.
  • Nut muffins: Replace the chocolate chips with chopped walnuts, almonds, or pecans.
  • Extract swaps: Replace part of the vanilla with almond, lemon, or butter extract for a different flavor without changing the batter structure.
  • Simple topping: Sprinkle the muffin tops with coarse sugar before baking, or dust the cooled muffins with powdered sugar. You can also drizzle cooled muffins with a simple powdered sugar glaze before serving.

Tips for Success

A few small baking habits make a big difference with gluten free muffins.

  • Use a reliable 1:1 flour blend: A gluten free all purpose baking blend gives the best texture and helps avoid gritty muffins.
  • Whisk the dry ingredients well: Evenly mixing the baking powder, salt, and flour helps the muffins rise evenly.
  • Mix gently: Stop mixing once the batter comes together so the muffins stay light and tender.
  • Fill the cups evenly: Filling each muffin cup ¾ full helps the muffins bake at the same rate.
  • Check early: Start checking at the low end of the bake time so the muffins stay moist.

Storage Options

Let the muffins cool completely before storing so the tops do not turn sticky.

  • Room temperature: Store muffins in an airtight container for up to 3 days.
  • Refrigerator: Refrigerate for up to 5 days if your kitchen is warm, but let them come to room temperature before serving.
  • Freezer: Wrap muffins individually and freeze for up to 2 months.
  • Reheating: Warm a muffin in the microwave for 10 to 15 seconds to soften the crumb and chocolate chips.

Related Recipes

  • Orange Chocolate Chip Muffins
  • Dairy Free Blueberry Muffins
  • Mini Pumpkin Muffins
  • Oat Flour Applesauce Muffins
  • Cornbread Muffins

Frequently Asked Questions

What gluten free flour works best for muffins?

Use a 1:1 gluten free all purpose baking blend made to replace regular all purpose flour. King Arthur Measure for Measure, Better Batter, and Cup4Cup are good options for muffins.

Do I have to use muffin paper liners?

No, but liners make cleanup easier and help the muffins lift out of the pan. For mini muffins or unlined pans, grease the muffin cups well with nonstick cooking spray.

Why are my gluten free muffins dry?

Dry gluten free muffins are usually caused by overbaking, using a flour blend that absorbs too much liquid, or measuring too much flour. Start checking at the low end of the bake time.

How do I know when gluten free muffins are done?

The tops should spring back lightly, and a toothpick inserted into the center should come out clean or with a few moist crumbs. Wet batter means they need more time.

Why did my muffins sink in the middle?

Muffins can sink if they are underbaked, overmixed, or if the oven door is opened too early. Bake until the centers are set before removing the pan from the oven.

Do I need to add xanthan gum to these muffins?

No. If you are using a 1:1 gluten free all purpose flour blend made for baking also, do not add extra xanthan gum. These blends are already formulated to replace regular flour, and adding more xanthan gum can make the muffins gummy instead of soft and fluffy.

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Get The Recipe!

Five golden brown gluten-free chocolate chip muffins cool on a black wire rack atop white marble, chips visible on top.
Pin Recipe Print Recipe
5 from 2 votes

Gluten Free Chocolate Chip Muffins

Gluten free chocolate chip muffins bake up tall, fluffy, and moist with 1:1 gluten free flour and lots of chocolate chips in every bite. The same easy batter makes 6 jumbo muffins, 12 regular muffins, or 24 mini muffins. Serve them for breakfast, brunch, snacks, or lunchbox treats.
Prep Time10 minutes mins
Cook Time25 minutes mins
Total Time35 minutes mins
Course: Breakfast, Snack
Cuisine: American
Servings: 6 Jumbo Muffins or 12 Standard Muffins
Calories: 368kcal
Author: Kelly Bloom
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Equipment

  • Jumbo Muffin Tin
  • Jumbo Muffin Papers

Ingredients

  • ⅓ cup vegetable oil
  • 1 large egg
  • ½ cup milk
  • 1½ teaspoon vanilla extract
  • 1½ cup gluten free flour King Aurther, Better Batter, Cup4Cup,
  • 2 tablespoon cornstarch
  • ¾ cup sugar
  • 2 teaspoon baking powder
  • 1 teaspoon salt
  • 1 cup chocolate chips
US Customary - Metric
Prevent your screen from going dark

Instructions

  • Preheat the oven to 375° F. Place Jumbo muffin liners in a 6 cavity Jumbo muffin pan.
  • Other Muffins Sizes: For regular size muffins, line a 12 cavity regular muffin pan. For mini size muffins, spray a 24 cavity muffin pan with non stick cooking spray.
  • Whisk the vegetable oil, egg, milk, and vanilla in a large mixing bowl.
    ⅓ cup vegetable oil, 1 large egg, ½ cup milk, 1½ teaspoon vanilla extract
  • In a separate medium size bowl, whisk the gluten free flour blend, cornstarch, sugar, baking powder, and salt so that all dry ingredients are evenly distributed.
    1½ cup gluten free flour, 2 tablespoon cornstarch, ¾ cup sugar, 2 teaspoon baking powder, 1 teaspoon salt
  • Add the dry ingredients to the wet ingredients and mix lightly, just until a few small streaks of flour remain.
  • Add the chocolate chips, and gently fold into the batter. Do not over mix batter. It may look a little lumpy.
    1 cup chocolate chips
  • Fill each muffin cup ¾ full, regardless of muffin cavity size chosen.
  • Bake Jumbo muffins for 22 to 25 minutes.
    Bake Regular size muffins 17 - 20 minutes.
    Bake mini muffins 10 to 14 minutes.
    Insert a tooth pick in a middle of the pan regular size muffin to check for doneness.
  • Transfer to a cooling rack and let cool for 10 to 15 minutes before tipping out of the muffin pan.

Notes

Muffin size Yield Bake time
Jumbo muffins   6 muffins     22 to 25 minutes
Regular muffins   12 muffins    17 to 20 minutes
Mini muffins   24 muffins    10 to 14 minutes
 
  • Use a reliable 1:1 flour blend: A gluten free all purpose baking blend gives the best texture and helps avoid gritty muffins.
  • Whisk the dry ingredients well: Evenly mixing the baking powder, salt, and flour helps the muffins rise evenly.
  • Mix gently: Stop mixing once the batter comes together so the muffins stay light and tender.
  • Fill the cups evenly: Filling each muffin cup ¾ full helps the muffins bake at the same rate.
  • Check early: Start checking at the low end of the bake time so the muffins stay moist.

Nutrition

Calories: 368kcal | Carbohydrates: 52g | Protein: 4g | Fat: 17g | Saturated Fat: 6g | Polyunsaturated Fat: 5g | Monounsaturated Fat: 3g | Trans Fat: 0.1g | Cholesterol: 25mg | Sodium: 218mg | Potassium: 98mg | Fiber: 2g | Sugar: 33g | Vitamin A: 58IU | Calcium: 112mg | Iron: 1mg

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Golden gluten free chocolate chip muffins stacked on a serving plate.

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Kelly Bloom, Smells Like Delish

Hi, I'm Kelly!

I create recipes that you can get on the table even when you’re tired and in a hurry. From breakfast to dinner, appetizers to desserts you'll find delicious recipes that are easy for busy people to make.

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